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| Registros recuperados : 16 | |
| 2. |  | AQUINO, L. M. de; CONTEVILLE, L. C.; ANDRADE, B. G. N.; ZERLOTINI NETO, A.; MOURÃO, G. B.; COUTINHO, L. L.; REGITANO, L. C. de A. Identificação de genes de resistência e elementos móveis no microbioma ruminal e fecal de touros Nelore. JORNADA CIENTÍFICA DA EMBRAPA SÃO CARLOS, 15., 2023, São Carlos, SP. Anais [...]. São Carlos, SP: Embrapa Pecuária Sudeste; Embrapa Instrumentação, 2023. p. 40. (Embrapa Pecuária Sudeste, Eventos técnicos & científicos, 01). Organizadores: Cintia Righetti Marcondes; Daniel Souza Corrêa. Evento virtual.| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Pecuária Sudeste. |
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| 3. | | SILVA, W. DOS S.; CARDOSO, T. F.; ANDRADE, B. G. N.; SILVA, J. V.; CONTEVILLE, L. C.; AFONSO, J.; BRUSCADIN, J.; OKINO, C. H.; KAPRITCHKOFF, R. T. I.; CHAGAS, A. C. de S.; REGITANO, L. C. de A. Componentes do microbioma fecal e ruminal associados à suscetibilidade à infecção por Haemonchus contortus em ovinos Morada Nova. In: JORNADA CIENTÍFICA DA EMBRAPA SÃO CARLOS, 14., 2022, São Carlos, SP. Anais... São Carlos, SP: Embrapa Instrumentação; Embrapa Pecuária Sudeste, 2022. p. 77. (Embrapa Instrumentação. Documentos, 73).| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 4. | | SOUZA, M. M. de; ZERLOTINI NETO, A.; ROCHA, M. I. P.; BRUSCADIN, J. J.; DINIZ, W. J. da S.; CARDOSO, T. F.; CESAR, A. S. M.; AFONSO, J.; ANDRADE, B. G. N.; MUDADU, M. de A.; MOKRY, F. B.; TIZIOTO, P. C.; OLIVEIRA, P. S. N. de; NICIURA, S. C. M.; COUTINHO, L. L.; REGITANO, L. C. de A. Allele-specific expression is widespread in Bos indicus muscle and affects meat quality candidate genes. Scientific Reports, v. 10, n. 1, p. 1-11, 2020. Na publicação: Adhemar Zerlotini. Article number: 10204.| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Pecuária Sudeste. |
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| 5. | | BRUSCADIN, J. J.; CARDOSO, T. F.; DINIZ, W. J. da S.; AFONSO, J.; SOUZA, M. M. de; PETRINI, J.; ANDRADE, B. G. N.; SILVA, V. H. da; FERRAZ, J. B. S.; ZERLOTINI NETO, A.; MOURÃO, G. B.; COUTINHO, L. L.; REGITANO, L. C. de A. Allele-specific expression reveals functional SNPs affecting muscle-related genes in bovine. Biochimica et Biophysica Acta. Gene Regulatory Mechanisms, v. 1865, n. 8, 194886, Nov. 2022.| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Pecuária Sudeste. |
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| 6. | | BRUSCADIN, J. J.; CARDOSO, T. F.; DINIZ, W. J. da S.; SOUZA, M. M. de; AFONSO, J.; VIEIRA, D.; MALHEIROS, J. M.; ANDRADE, B. G. N.; PETRINI, J.; FERRAZ, J. B. S.; ZERLOTINI NETO, A.; MOURÃO, G. B.; COUTINHO, L. L.; REGITANO, L. C. de A. Differential allele-specific expression revealed functional variants and candidate genes related to meat quality traits in B. indicus muscle. Genes, v. 13, n. 12, 2336, 2022.| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Pecuária Sudeste. |
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| 7. | | CARDOSO, T. F.; BRUSCADIN, J. J.; AFONSO, J.; PETRINI, J.; ANDRADE, B. G. N.; OLIVEIRA, P. S. N. de; MALHEIROS, J. M.; ROCHA, M. I. P.; ZERLOTINI NETO, A.; FERRAZ, J. B. S.; MOURÃO, G. B.; COUTINHO, L. L.; REGITANO, L. C. de A. EEF1A1 transcription cofactor gene polymorphism is associated with muscle gene expression and residual feed intake in Nelore cattle. Mammalian Genome, v. 33, n. 4, p. 619-628, Dec. 2022.| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Pecuária Sudeste. |
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| 8. | | BUSS, C. E.; AFONSO, J.; OLIVEIRA, P. S. N. DE; PETRINI, J.; TIZIOTO, P. C.; CESAR, A. S. M.; GUSTANI-BUSS, E. C.; CARDOSO, T. F.; ROVADOSKI, G. A.; DINIZ, W. J. DA S.; LIMA, A. O. DE; ROCHA, M. I. P.; ANDRADE, B. G. N.; WOLF, J. B.; COUTINHO, L. L.; MOURÃO, G. B.; REGITANO, L. C. de A. Bivariate GWAS reveals pleiotropic regions among feed efficiency and beef quality-related traits in Nelore cattle. Mammalian Genome, v. 34, p. 90-103, dec. 2022.| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 9. | | CARDOSO, T. F.; BRUSCADIN, J. J.; DINIZ, W. J. da S.; BANERJEE, P.; AFONSO, J.; ANDRADE, B. G. N. B; MALHEIROS, J. M.; ZERLOTINI NETO, A.; VIEIRA, D. da S.; FERNANDES, A. C.; CESAR, A. S. M.; MOURÃO, G. B.; COUTINHO, L. L.; REGITANO, L. C. de A. Integration of different omics layers with SNP-SNP interaction networks associated with methane emission in nelore cattle. In: BRAZILIAN CONGRESS OF GENETICS, 67., 2022, Natal. [Abstracts]. Ribeirão Preto: Sociedade Brasileira de Genética, 2022. p. 247. e-book. Na publicação: Adhemar Zerlotini.| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Pecuária Sudeste. |
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| 10. | | MALHEIROS, J. M.; CORREIA, B. S. B.; CERIBELI, C.; BRUSCADIN, J. J.; DINIZ, W. J. S.; BANERJEE, P.; VIEIRA, D. S.; CARDOSO, T. F.; ANDRADE, B. G. N.; PETRINI, J.; CARDOSO, D. R.; COLNAGO, L. A.; BOGUSZ JUNIOR, S.; MOURÃO, G. B.; COUTINHO, L. L.; PALHARES, J. C. P.; MEDEIROS, S. R. de; BERNDT, A.; REGITANO, L. C. de A. Ruminal and feces metabolites associated with feed efciency, water intake and methane emission in Nelore bulls. Scientifc Reports, v. 13, 18001, 2023. 13 p.| Biblioteca(s): Embrapa Instrumentação; Embrapa Pecuária Sudeste. |
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| 11. | | LIMA, A. O.; MALHEIROS, J. M.; AFONSO, J.; PETRINI, J.; COUTINHO, L. L.; DINIZ, W. J. da S.; DONATONI, F. A. B.; TIZIOTO, P. C.; OLIVEIRA, P. S. N. de; RIBEIRO, J. A. S.; OLIVEIRA, K. S. de; ROCHA, M. I. P.; ANDRADE, B. G. N.; FUKUMASU, H.; BEIKI, H.; REECY, J. M.; ZERLOTINI NETO, A.; MOURAO, G. B.; REGITANO, L. C. de A. Prune homolog 2 with BCH domain (PRUNE2) gene expression is associated with feed efficiency related traits in Nelore steers. Mammalian Genome, 2022.| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Pecuária Sudeste. |
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| 12. | | AFONSO, J.; COUTINHO, L. L.; TIZIOTO, P. C.; DINIZ, W. J. da S.; LIMA, A. O. de; ROCHA, M. I. P.; BUSS, C, E.; ANDRADE, B. G. N. A.; PIAYA. O.; SILVA, J. V.; LINS, L. A.; GROMBONI, C. F.; NOGUEIRA, A. R. de A.; FORTES, M. R. S.; MOURÃO, G. B.; REGITANO, L. C. de A. Muscle transcriptome analysis reveals genes and metabolic pathways related to mineral concentration in Bos indicus. Scientific Reports, v. 9, n. 12715, 2019.| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 13. | | CARDOSO, T. F.; COUTINHO, L. L.; BRUSCADIN, J. J.; DINIZ, W. J. da S.; PETRINI, J.; ANDRADE, B. G. N.; OLIVEIRA, P. S. N. de; POLETI, M. D.; CESAR, A. S. M.; SILVEIRA, J. C. DA; CHIARATTI, M. R.; ZERLOTINI NETO, A.; MOURÃO, G. B.; REGITANO, L. C. de A. Multi-omics approach reveals miR-SNPs affecting muscle fatty acids profile in Nelore cattle. Genes, v. 12, n. 1, p. 1-18, Jan. 2021. Article 67. Na publicação: Adhemar Zerlotini.| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Pecuária Sudeste. |
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| 14. | | PAZ VENTERO, M.; CUADRAT, R. R. C.; VIDAL, I.; ANDRADE, B. G. N.; MOLINA-PARDINES, C.; HARI-MORENO, J. M.; COUTINHO, F. H.; MERINO, E.; REGITANO, L. C. de A.; SILVEIRA, C. B.; AFLI, H.; LÓPEZ-PÉREZ, M.; RODRÍGUEZ, J. C. Nasopharyngeal microbial communities of patients infected with SARS-CoV-2 that developed COVID-19. Frontiers in Microbiology, v.12, 637430, mar. 2021 10 p.| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 15. | | ANDRADE, B. G. N.; DONATONI, F. A. B.; CUADRAT, R. R. C.; TIZIOTO, P. C.; OLIVEIRA, P. S. N. de; MOURÃO, G. B.; COUTINHO, L. L.; REECY, J. M.; KOLTES, J. E.; WALSH, P.; BERNDT, A.; PALHARES, J. C. P.; REGITANO, L. C. de A. The structure of microbial populations in Nelore GIT reveals inter-dependency of methanogens in feces and rumen. Journal of Animal Science and Biotechnology, v.11, n. 6, 2020. 10 p.| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 16. | | ANDRADE, B. G. N.; DONATONI, F. A. B.; CUADRAT, R. R.; CARDOSO, T. F.; MALHEIROS, J. M.; OLIVEIRA, P. S. N. DE; PETRINI, J.; MOURÃO, G. B.; COUTINHO, L. L.; REECY, J. M.; KOLTES, J. E.; ZERLOTINI NETO, A.; MEDEIROS, S. R. de; BERNDT, A.; PALHARES, J. C. P.; AFLI, H.; REGITANO, L. C. de A. Stool and ruminal microbiome components associated with methane emission and feed efficiency in Nelore beef cattle. Frontiers in Genetics, v. 13, 812828, may, 2022. 12 p.| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Pecuária Sudeste. |
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| Registros recuperados : 16 | |
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Registro Completo
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Biblioteca(s): |
Embrapa Agricultura Digital; Embrapa Pecuária Sudeste. |
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Data corrente: |
31/08/2022 |
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Data da última atualização: |
17/11/2022 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Circulação/Nível: |
A - 1 |
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Autoria: |
ANDRADE, B. G. N.; DONATONI, F. A. B.; CUADRAT, R. R.; CARDOSO, T. F.; MALHEIROS, J. M.; OLIVEIRA, P. S. N. DE; PETRINI, J.; MOURÃO, G. B.; COUTINHO, L. L.; REECY, J. M.; KOLTES, J. E.; ZERLOTINI NETO, A.; MEDEIROS, S. R. de; BERNDT, A.; PALHARES, J. C. P.; AFLI, H.; REGITANO, L. C. de A. |
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Afiliação: |
BRUNO G. N. ANDRADE, Munster Technological University; FLAVIA ALINE BRESSANI DONATONI, CPPSE; RAFAEL R. C. CUADRAT, German Institute of Human Nutrition Potsdam-Rehbrücke (DIfE), Nuthetal, Germany; TAINÃ F. CARDOSO, FUNDAÇÃO DE AMPARO À PESQUISA DO ESTADO DE SÃO PAULO; JESSICA M. MALHEIROS, UNIVERSIDADE FEDERAL DE SÃO CARLOS; PRISCILA S. N. DE OLIVEIRA, UNIVERSIDADE FEDERAL DE SÃO CARLOS; JULIANA PETRINI, UNIVERSIDADE DE SÃO PAULO; GERSON B. MOURÃO, UNIVERSIDADE DE SÃO PAULO; LUIZ L. COUTINHO, UNIVERSIDADE DE SÃO PAULO; JAMES M. REECY, Iowa State University; JAMES E. KOLTES, Iowa State University; ADHEMAR ZERLOTINI NETO, CNPTIA; SERGIO RAPOSO DE MEDEIROS, CPPSE; ALEXANDRE BERNDT, CPPSE; JULIO CESAR PASCALE PALHARES, CPPSE; HAITHEM AFLI, Munster Technological University; LUCIANA CORREIA DE ALMEIDA REGITANO, CPPSE. |
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Título: |
Stool and ruminal microbiome components associated with methane emission and feed efficiency in Nelore beef cattle. |
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Ano de publicação: |
2022 |
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Fonte/Imprenta: |
Frontiers in Genetics, v. 13, 812828, may, 2022. |
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Páginas: |
12 p. |
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DOI: |
10.3389/fgene.2022.812828 |
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Idioma: |
Inglês |
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Conteúdo: |
Background: The impact of extreme changes in weather patterns on the economy and human welfare is one of the biggest challenges our civilization faces. From anthropogenic contributions to climate change, reducing the impact of farming activities is a priority since it is responsible for up to 18% of global greenhouse gas emissions. To this end, we tested whether ruminal and stool microbiome components could be used as biomarkers for methane emission and feed efficiency in bovine by studying 52 Brazilian Nelore bulls belonging to two feed intervention treatment groups, that is, conventional and by-product-based diets.
Results: We identified a total of 5,693 amplicon sequence variants (ASVs) in the Nelore bulls? microbiomes. A Differential abundance analysis with the ANCOM approach identified 30 bacterial and 15 archaeal ASVs as differentially abundant (DA) among treatment groups. An association analysis using Maaslin2 software and a linear mixed model indicated that bacterial ASVs are linked to the host?s residual methane emission (RCH4) and residual feed intake (RFI) phenotype variation, suggesting their potential as targets for interventions or biomarkers.
Conclusion: The feed composition induced significant differences in both abundance and richness of ruminal and stool microbial populations in ruminants of the Nelore breed. The industrial by-product-based dietary treatment applied to our experimental groups influenced the microbiome diversity of bacteria and archaea but not of protozoa. ASVs were associated with RCH4 emission and RFI in ruminal and stool microbiomes. While ruminal ASVs were expected to influence CH4 emission and RFI, the relationship of stool taxa, such as Alistipes and Rikenellaceae (gut group RC9), with these traits was not reported before and might be associated with host health due to their link to anti-inflammatory compounds. Overall, the ASVs associated here have the potential to be used as biomarkers for these complex phenotypes. MenosBackground: The impact of extreme changes in weather patterns on the economy and human welfare is one of the biggest challenges our civilization faces. From anthropogenic contributions to climate change, reducing the impact of farming activities is a priority since it is responsible for up to 18% of global greenhouse gas emissions. To this end, we tested whether ruminal and stool microbiome components could be used as biomarkers for methane emission and feed efficiency in bovine by studying 52 Brazilian Nelore bulls belonging to two feed intervention treatment groups, that is, conventional and by-product-based diets.
Results: We identified a total of 5,693 amplicon sequence variants (ASVs) in the Nelore bulls? microbiomes. A Differential abundance analysis with the ANCOM approach identified 30 bacterial and 15 archaeal ASVs as differentially abundant (DA) among treatment groups. An association analysis using Maaslin2 software and a linear mixed model indicated that bacterial ASVs are linked to the host?s residual methane emission (RCH4) and residual feed intake (RFI) phenotype variation, suggesting their potential as targets for interventions or biomarkers.
Conclusion: The feed composition induced significant differences in both abundance and richness of ruminal and stool microbial populations in ruminants of the Nelore breed. The industrial by-product-based dietary treatment applied to our experimental groups influenced the microbiome diversity of bacteria and archaea but... Mostrar Tudo |
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Palavras-Chave: |
Associação; Association; Biomarcadores; Eficiência alimentar; Emissão de metano; Feed efficiency; Methane emission. |
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Thesagro: |
Bactéria; Bos Indicus; Gado de Corte. |
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Thesaurus NAL: |
Archaea; Beef cattle; Biomarkers. |
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Categoria do assunto: |
G Melhoramento Genético |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/doc/1145925/1/StoolRuminalMicrobiome.pdf
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Marc: |
LEADER 03376naa a2200493 a 4500
001 2145925
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008 2022 bl uuuu u00u1 u #d
024 7 $a10.3389/fgene.2022.812828$2DOI
100 1 $aANDRADE, B. G. N.
245 $aStool and ruminal microbiome components associated with methane emission and feed efficiency in Nelore beef cattle.$h[electronic resource]
260 $c2022
300 $a12 p.
520 $aBackground: The impact of extreme changes in weather patterns on the economy and human welfare is one of the biggest challenges our civilization faces. From anthropogenic contributions to climate change, reducing the impact of farming activities is a priority since it is responsible for up to 18% of global greenhouse gas emissions. To this end, we tested whether ruminal and stool microbiome components could be used as biomarkers for methane emission and feed efficiency in bovine by studying 52 Brazilian Nelore bulls belonging to two feed intervention treatment groups, that is, conventional and by-product-based diets. Results: We identified a total of 5,693 amplicon sequence variants (ASVs) in the Nelore bulls? microbiomes. A Differential abundance analysis with the ANCOM approach identified 30 bacterial and 15 archaeal ASVs as differentially abundant (DA) among treatment groups. An association analysis using Maaslin2 software and a linear mixed model indicated that bacterial ASVs are linked to the host?s residual methane emission (RCH4) and residual feed intake (RFI) phenotype variation, suggesting their potential as targets for interventions or biomarkers. Conclusion: The feed composition induced significant differences in both abundance and richness of ruminal and stool microbial populations in ruminants of the Nelore breed. The industrial by-product-based dietary treatment applied to our experimental groups influenced the microbiome diversity of bacteria and archaea but not of protozoa. ASVs were associated with RCH4 emission and RFI in ruminal and stool microbiomes. While ruminal ASVs were expected to influence CH4 emission and RFI, the relationship of stool taxa, such as Alistipes and Rikenellaceae (gut group RC9), with these traits was not reported before and might be associated with host health due to their link to anti-inflammatory compounds. Overall, the ASVs associated here have the potential to be used as biomarkers for these complex phenotypes.
650 $aArchaea
650 $aBeef cattle
650 $aBiomarkers
650 $aBactéria
650 $aBos Indicus
650 $aGado de Corte
653 $aAssociação
653 $aAssociation
653 $aBiomarcadores
653 $aEficiência alimentar
653 $aEmissão de metano
653 $aFeed efficiency
653 $aMethane emission
700 1 $aDONATONI, F. A. B.
700 1 $aCUADRAT, R. R.
700 1 $aCARDOSO, T. F.
700 1 $aMALHEIROS, J. M.
700 1 $aOLIVEIRA, P. S. N. DE
700 1 $aPETRINI, J.
700 1 $aMOURÃO, G. B.
700 1 $aCOUTINHO, L. L.
700 1 $aREECY, J. M.
700 1 $aKOLTES, J. E.
700 1 $aZERLOTINI NETO, A.
700 1 $aMEDEIROS, S. R. de
700 1 $aBERNDT, A.
700 1 $aPALHARES, J. C. P.
700 1 $aAFLI, H.
700 1 $aREGITANO, L. C. de A.
773 $tFrontiers in Genetics$gv. 13, 812828, may, 2022.
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Embrapa Pecuária Sudeste (CPPSE) |
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